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med_cardiac_arrhythmia.rs
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342 lines (301 loc) · 12.3 KB
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//! Cardiac arrhythmia detection — ADR-041 Category 1 Medical module.
//!
//! Monitors heart rate from host CSI pipeline and detects:
//! - Tachycardia: sustained HR > 100 BPM
//! - Bradycardia: sustained HR < 50 BPM
//! - Missed beats: sudden HR dips > 30% below running average
//! - HRV anomaly: RMSSD outside normal range over 30-second window
//!
//! Events:
//! TACHYCARDIA (110) — sustained high heart rate
//! BRADYCARDIA (111) — sustained low heart rate
//! MISSED_BEAT (112) — abrupt HR drop suggesting missed beat
//! HRV_ANOMALY (113) — heart rate variability outside normal bounds
//!
//! Host API inputs: heart rate BPM, phase.
//! Budget: S (< 5 ms).
// ── libm for no_std math ────────────────────────────────────────────────────
#[cfg(not(feature = "std"))]
use libm::sqrtf;
#[cfg(feature = "std")]
fn sqrtf(x: f32) -> f32 { x.sqrt() }
#[cfg(not(feature = "std"))]
use libm::fabsf;
#[cfg(feature = "std")]
fn fabsf(x: f32) -> f32 { x.abs() }
// ── Constants ───────────────────────────────────────────────────────────────
/// HR threshold for tachycardia (BPM).
const TACHY_THRESH: f32 = 100.0;
/// HR threshold for bradycardia (BPM).
const BRADY_THRESH: f32 = 50.0;
/// Consecutive seconds above/below threshold before alert.
const SUSTAINED_SECS: u8 = 10;
/// Missed-beat detection: fractional drop from running average.
const MISSED_BEAT_DROP: f32 = 0.30;
/// RMSSD window size (seconds at ~1 Hz).
const HRV_WINDOW: usize = 30;
/// Normal RMSSD range (ms). CSI-derived HR is coarser than ECG so the
/// "normal" band is widened. Values outside trigger HRV_ANOMALY.
const RMSSD_LOW: f32 = 10.0;
const RMSSD_HIGH: f32 = 120.0;
/// Running-average EMA coefficient.
const EMA_ALPHA: f32 = 0.1;
/// Alert cooldown (seconds) to avoid event flooding.
const COOLDOWN_SECS: u16 = 30;
// ── Event IDs ───────────────────────────────────────────────────────────────
pub const EVENT_TACHYCARDIA: i32 = 110;
pub const EVENT_BRADYCARDIA: i32 = 111;
pub const EVENT_MISSED_BEAT: i32 = 112;
pub const EVENT_HRV_ANOMALY: i32 = 113;
// ── State ───────────────────────────────────────────────────────────────────
/// Cardiac arrhythmia detector.
pub struct CardiacArrhythmiaDetector {
/// EMA of heart rate.
hr_ema: f32,
/// Whether the EMA has been initialised.
ema_init: bool,
/// Ring buffer of successive RR differences (BPM deltas, 1 Hz).
rr_diffs: [f32; HRV_WINDOW],
rr_idx: usize,
rr_len: usize,
/// Previous HR sample for delta computation.
prev_hr: f32,
prev_hr_init: bool,
/// Sustained-rate counters.
tachy_count: u8,
brady_count: u8,
/// Per-event cooldowns.
cd_tachy: u16,
cd_brady: u16,
cd_missed: u16,
cd_hrv: u16,
/// Frame counter.
frame_count: u32,
}
impl CardiacArrhythmiaDetector {
pub const fn new() -> Self {
Self {
hr_ema: 0.0,
ema_init: false,
rr_diffs: [0.0; HRV_WINDOW],
rr_idx: 0,
rr_len: 0,
prev_hr: 0.0,
prev_hr_init: false,
tachy_count: 0,
brady_count: 0,
cd_tachy: 0,
cd_brady: 0,
cd_missed: 0,
cd_hrv: 0,
frame_count: 0,
}
}
/// Process one frame at ~1 Hz. `hr_bpm` is the host-reported heart rate,
/// `_phase` is reserved for future RR-interval extraction from CSI phase.
///
/// Returns `&[(event_id, value)]`.
pub fn process_frame(&mut self, hr_bpm: f32, _phase: f32) -> &[(i32, f32)] {
self.frame_count += 1;
// Tick cooldowns.
self.cd_tachy = self.cd_tachy.saturating_sub(1);
self.cd_brady = self.cd_brady.saturating_sub(1);
self.cd_missed = self.cd_missed.saturating_sub(1);
self.cd_hrv = self.cd_hrv.saturating_sub(1);
static mut EVENTS: [(i32, f32); 4] = [(0, 0.0); 4];
let mut n = 0usize;
// Ignore invalid / zero / NaN readings.
// NaN comparisons return false, so we must check explicitly to prevent
// NaN from contaminating the EMA and RMSSD calculations.
if !(hr_bpm >= 1.0) {
return unsafe { &EVENTS[..n] };
}
// ── EMA update ──────────────────────────────────────────────────
if !self.ema_init {
self.hr_ema = hr_bpm;
self.ema_init = true;
} else {
self.hr_ema += EMA_ALPHA * (hr_bpm - self.hr_ema);
}
// ── RR-diff ring buffer (for RMSSD) ─────────────────────────────
if self.prev_hr_init {
let diff = hr_bpm - self.prev_hr;
self.rr_diffs[self.rr_idx] = diff;
self.rr_idx = (self.rr_idx + 1) % HRV_WINDOW;
if self.rr_len < HRV_WINDOW {
self.rr_len += 1;
}
}
self.prev_hr = hr_bpm;
self.prev_hr_init = true;
// ── Tachycardia ─────────────────────────────────────────────────
if hr_bpm > TACHY_THRESH {
self.tachy_count = self.tachy_count.saturating_add(1);
if self.tachy_count >= SUSTAINED_SECS && self.cd_tachy == 0 && n < 4 {
unsafe { EVENTS[n] = (EVENT_TACHYCARDIA, hr_bpm); }
n += 1;
self.cd_tachy = COOLDOWN_SECS;
}
} else {
self.tachy_count = 0;
}
// ── Bradycardia ─────────────────────────────────────────────────
if hr_bpm < BRADY_THRESH {
self.brady_count = self.brady_count.saturating_add(1);
if self.brady_count >= SUSTAINED_SECS && self.cd_brady == 0 && n < 4 {
unsafe { EVENTS[n] = (EVENT_BRADYCARDIA, hr_bpm); }
n += 1;
self.cd_brady = COOLDOWN_SECS;
}
} else {
self.brady_count = 0;
}
// ── Missed beat ─────────────────────────────────────────────────
if self.ema_init && self.hr_ema > 1.0 {
let drop_frac = (self.hr_ema - hr_bpm) / self.hr_ema;
if drop_frac > MISSED_BEAT_DROP && self.cd_missed == 0 && n < 4 {
unsafe { EVENTS[n] = (EVENT_MISSED_BEAT, hr_bpm); }
n += 1;
self.cd_missed = COOLDOWN_SECS;
}
}
// ── HRV (RMSSD) anomaly ─────────────────────────────────────────
if self.rr_len >= HRV_WINDOW && n < 4 {
let rmssd = self.compute_rmssd();
if (rmssd < RMSSD_LOW || rmssd > RMSSD_HIGH) && self.cd_hrv == 0 {
unsafe { EVENTS[n] = (EVENT_HRV_ANOMALY, rmssd); }
n += 1;
self.cd_hrv = COOLDOWN_SECS;
}
}
unsafe { &EVENTS[..n] }
}
/// Compute RMSSD from the RR-diff ring buffer.
///
/// RMSSD = sqrt(mean(diff_i^2)) where diff_i are successive differences.
/// Since host reports BPM (not ms RR intervals), we scale the result.
fn compute_rmssd(&self) -> f32 {
if self.rr_len < 2 {
return 0.0;
}
let mut sum_sq = 0.0f32;
// We need successive differences of successive differences, but our
// ring buffer already stores successive HR deltas. We use successive
// differences of those (second-order) for a proxy of RR variability.
// For simplicity, use the stored deltas directly: RMSSD ≈ sqrt(mean(d^2)).
for i in 0..self.rr_len {
let d = self.rr_diffs[i];
sum_sq += d * d;
}
let msd = sum_sq / self.rr_len as f32;
// Convert from BPM^2 to approximate ms-equivalent:
// At 60 BPM, 1 BPM change ≈ 16.7 ms RR change. Scale factor ~17.
sqrtf(msd) * 17.0
}
/// Current EMA heart rate.
pub fn hr_ema(&self) -> f32 {
self.hr_ema
}
/// Frame count.
pub fn frame_count(&self) -> u32 {
self.frame_count
}
}
// ── Tests ───────────────────────────────────────────────────────────────────
#[cfg(test)]
mod tests {
use super::*;
#[test]
fn test_init() {
let d = CardiacArrhythmiaDetector::new();
assert_eq!(d.frame_count(), 0);
assert!((d.hr_ema() - 0.0).abs() < 0.001);
}
#[test]
fn test_normal_hr_no_events() {
let mut d = CardiacArrhythmiaDetector::new();
for _ in 0..60 {
let ev = d.process_frame(72.0, 0.0);
for &(t, _) in ev {
assert!(
t != EVENT_TACHYCARDIA && t != EVENT_BRADYCARDIA && t != EVENT_MISSED_BEAT,
"no arrhythmia events with normal HR"
);
}
}
}
#[test]
fn test_tachycardia_detection() {
let mut d = CardiacArrhythmiaDetector::new();
let mut found = false;
for _ in 0..20 {
let ev = d.process_frame(120.0, 0.0);
for &(t, _) in ev {
if t == EVENT_TACHYCARDIA { found = true; }
}
}
assert!(found, "tachycardia should trigger with sustained HR > 100");
}
#[test]
fn test_bradycardia_detection() {
let mut d = CardiacArrhythmiaDetector::new();
let mut found = false;
for _ in 0..20 {
let ev = d.process_frame(40.0, 0.0);
for &(t, _) in ev {
if t == EVENT_BRADYCARDIA { found = true; }
}
}
assert!(found, "bradycardia should trigger with sustained HR < 50");
}
#[test]
fn test_missed_beat_detection() {
let mut d = CardiacArrhythmiaDetector::new();
// Build up EMA at normal rate.
for _ in 0..20 {
d.process_frame(72.0, 0.0);
}
// Sudden drop.
let mut found = false;
let ev = d.process_frame(40.0, 0.0);
for &(t, _) in ev {
if t == EVENT_MISSED_BEAT { found = true; }
}
assert!(found, "missed beat should trigger on sudden HR drop > 30%");
}
#[test]
fn test_hrv_anomaly_low_variability() {
let mut d = CardiacArrhythmiaDetector::new();
// Feed perfectly constant HR to produce RMSSD ≈ 0 (below RMSSD_LOW).
let mut found = false;
for _ in 0..60 {
let ev = d.process_frame(72.0, 0.0);
for &(t, _) in ev {
if t == EVENT_HRV_ANOMALY { found = true; }
}
}
// Constant HR → zero successive differences → RMSSD ~ 0 → below RMSSD_LOW.
assert!(found, "HRV anomaly should trigger with near-zero variability");
}
#[test]
fn test_cooldown_prevents_flooding() {
let mut d = CardiacArrhythmiaDetector::new();
let mut tachy_count = 0u32;
for _ in 0..100 {
let ev = d.process_frame(120.0, 0.0);
for &(t, _) in ev {
if t == EVENT_TACHYCARDIA { tachy_count += 1; }
}
}
// With a 30-second cooldown over 100 frames, we should see <=4 events.
assert!(tachy_count <= 4, "cooldown should prevent event flooding, got {}", tachy_count);
}
#[test]
fn test_ema_tracks_hr() {
let mut d = CardiacArrhythmiaDetector::new();
for _ in 0..200 {
d.process_frame(80.0, 0.0);
}
assert!((d.hr_ema() - 80.0).abs() < 1.0, "EMA should converge to steady HR");
}
}