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pabannier/README.md

I'm building autonomous AI agents that discover shared biology across cancer, autoimmune, and inflammatory disease, from H&E slides, spatial proteomics, and multiomics. Currently: founder, building in the open. Previously: 3 years at Owkin shipping production pathology AI.

I'm working on HistoAtlas, a pan-cancer histomics atlas with an MCP server for AI co-scientist agents.

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  1. bark.cpp bark.cpp Public

    Suno AI's Bark model in C/C++ for fast text-to-speech generation

    C++ 857 79

  2. encodec.cpp encodec.cpp Public

    Port of Meta's Encodec in C/C++

    C++ 228 20

  3. biogpt.cpp biogpt.cpp Public

    Port of Microsoft's BioGPT in C/C++ using ggml

    C++ 86 5

  4. scikit-learn-contrib/skglm scikit-learn-contrib/skglm Public

    Fast and modular sklearn replacement for generalized linear models

    Python 193 42

  5. WSIStreamer WSIStreamer Public

    A tile server for WSI stored in S3-compatible object storage. It serves tiles on-demand using HTTP range requests, so you never have to download or mount multi-gigabyte slides on local disk.

    Rust 180 3

  6. PathCollab PathCollab Public

    A self-hosted collaborative digital pathology viewer with real-time cursor presence and overlays

    TypeScript 29 2